Publications and open-data - Bordeaux Metabolome

Publications 2024

Julia Pastor-Fernández, Neus Sanmartín, Maria Manresa-Grao, Cédric Cassan, Pierre Pétriacq, Yves Gibon, Jordi Gamir, Beatriz Romero-Rodriguez, Araceli G Castillo, Miguel Cerezo, Victor Flors and Paloma Sánchez-Bel (2024). Deciphering molecular events behind Systemin-induced resistance to Botrytis cinerea in tomato plants. Journal of Experimental Botany [link to the publication]
A. E. Hay, C. Deborde, T. Dussarrat, A. Moing, A. Millery, T. P. T. Hoang, D. Touboul, M. Rey, L. Ledru, S. Ibanez, P. Pétriacq, C. Vanhaverbeke and C. Gallet (2024). Comparative metabolomics reveals how the severity of predation by the invasive insect Cydalima perspectalis modulates the metabolism re–orchestration of native Buxus sempervirens. Plant Biology [link to the publication] [link to the data used in the publication]
Smokvarska M., Perez-Sancho J., Glavier M., Sritharan S., Dubois G., Dietrich V., Platre M. P., Li Z. P., Paterlini A., Moreau H., Fouillen L., GRISON M. S., Cana-Quijada P., Moraes T. S., Immel F., Wattelet V., Ducros M., Brocard L., Chambaud C., Zabrady M., Luo Y., Busch W., Tilsner J., Helariutta Y., Russinova J., Taly A., Jaillais Y. and Bayer E. (2024). Plasmodesmata act as unconventional membrane contact sites regulating inter-cellular molecular exchange in plants. bioRxiv [link to the publication]
N. Guibert, S. Prigent, P. Pétriacq, JM. Deogratias and C. Cabasson (2024). Modelling the effect of biostimulants on horticultural crop performance of Poinsettia: an approach combining non-targeted plant analysis methods and data science. Acta Horticulturae [link to the publication] [link to the data used in the publication]
Caroline Roux, Cassandre Madru, Débora Millan Navarro, Gwilherm Jan, Nicolas Mazzella, Aurélie Moreira, Jacky Vedrenne, Laure Carassou and Soizic Morin (2024). Impact of urban pollution on freshwater biofilms: Oxidative stress, photosynthesis and lipid responses. Journal of Hazardous Materials [link to the publication]
Louise Fougère, Sébastien Mongrand and Yohann Boutté (2024). The function of sphingolipids in membrane trafficking and cell signaling in plants, in comparison with yeast and animal cells. Biochimica et Biophysica Acta (BBA) – Molecular and Cell Biology of Lipids [link to the publication]
Delphine Bahammou, Ghislaine Recorbet, Adiilah Mamode Cassim, Franck Robert, Thierry Balliau, Pierre Van Delft, Youcef Haddad, Sébastien Mongrand, Laetitia Fouillen and Françoise Simon‐Plas (2024). A combined lipidomic and proteomic profiling of Arabidopsis thaliana plasma membrane. The Plant Journal [link to the publication] [link to the data used in the publication]
Charles Tardif, Caroline Rouger, Julie Miranda, Omar S. Ahmed, Florence Richard-Forget, Vessela Atanasova and Pierre Waffo-Teguo (2024). Targeting of Antifungal Metabolites from Grapevine Byproducts by UPLC–HRMS/MS Approaches Using Bioactivity-Based Molecular Networking. Journal of Agricultural and Food Chemistry [link to the publication]
Pierre Baldet, Kentaro Mori, Guillaume Decros, Bertrand Beauvoit, Sophie Colombié, Sylvain Prigent, Pierre Pétriacq and Yves Gibon (2024). Multi-regulated GDP-l-galactose phosphorylase calls the tune in ascorbate biosynthesis. Journal of Experimental Botany [link to the publication]
Mélanie Lavoignat, Cédric Cassan, Pierre Pétriacq, Yves Gibon, Emmanuel Heumez, Céline Duque, Philippe Momont, Renaud Rincent, Justin Blancon, Catherine Ravel and Jacques Le Gouis (2024). Different wheat loci are associated to heritable free asparagine content in grain grown under different water and nitrogen availability. Theoretical and Applied Genetics [link to the publication]
Manon Genva, Louise Fougère, Delphine Bahammou, Sébastien Mongrand, Yohann Boutté and Laetitia Fouillen (2024). A global LC–MS2‐based methodology to identify and quantify anionic phospholipids in plant samples. The Plant Journal [link to the publication] [link to the data used in the publication]
Schnebert S., Velez E. J., Goguet M., Dias K., Veron V., Garcia-Perez I., Radler L. M., Cardona E., Fontagne-Dicharry S., Van-Delft P., Dittrich-Domergue F., Bernard A., Beaumatin F., Herpin A., Cleveland B. and Seiliez I. (2024). Chaperone-Mediated Autophagy in Fish: A Key Function Amid a Changing Environment. bioRxiv [link to the publication]
Laetitia Fouillen, Lilly Maneta-Peyret and Patrick Moreau (2024). ER Membrane Lipid Composition and Metabolism: Lipidomic Analysis. The Plant Endoplasmic Reticulum [link to the publication]
Patricia Laquel, Sophie Ayciriex, François Doignon, Nadine Camougrand, Louise Fougère, Christophe Rocher, Valérie Wattelet‐Boyer, Jean‐Jacques Bessoule and Eric Testet (2024). Mlg1, a yeast acyltransferase located in ER membranes associated with mitochondria (MAMs), is involved in de novo synthesis and remodelling of phospholipids. The FEBS Journal [link to the publication]
Francisca P. Díaz, Thomas Dussarrat, Gabriela Carrasco‐Puga, Sophie Colombié, Sylvain Prigent, Guillaume Decros, Stéphane Bernillon, Cédric Cassan, Amélie Flandin, Pablo C. Guerrero, Yves Gibon, Dominique Rolin, Lohengrin A. Cavieres, Pierre Pétriacq, Claudio Latorre and Rodrigo A. Gutiérrez (2024). Ecological and metabolic implications of the nurse effect of Maihueniopsis camachoi in the Atacama Desert. New Phytologist [link to the publication] [link to the data used in the publication]
Julie Miranda, Cécile Miot-Sertier, Laura Olazabal, Warren Albertin, Tristan Richard, Grégory Da Costa, Caroline Rouger and Marguerite Dols-Lafargue (2024). Bordeaux red wines display variable intrinsic ability to support Brettanomyces bruxellensis growth. Food Control [link to the publication]

Publications 2023

Dussarrat T., Latorre C., Barros Santos M. C., Aguado-Norese C., Prigent S., Diaz F. P., Rolin D., Gonzalez M., Müller C., Gutierrez R. A. and Petriacq P. (2023). Convergent and divergent responses of the rhizosphere chemistry and bacterial communities to a stress gradient in the Atacama Desert.. bioRxiv [link to the publication]
Simon Roques, Catherine Deborde, Sandrine Skiba-Cassy, Françoise Médale, Mathilde Dupont-Nivet, Florence Lefevre, Jérome Bugeon, Laurent Labbé, Yann Marchand, Annick Moing and Benoit Fauconneau (2023). New alternative ingredients and genetic selection are the next game changers in rainbow trout nutrition: a metabolomics appraisal. Scientific Reports [link to the publication]
Nicolas Mazzella, Romain Vrba, Aurélie Moreira, Nicolas Creusot, Mélissa Eon, Débora MillanNavarro, Isabelle Lavoie and Soizic Morin (2023). Mixed light photoperiod and biocide pollution affect lipid profiles of periphyton communities in freshwater ecosystems. Journal of Hazardous Materials Advances [link to the publication] [link to the data used in the publication]
Eva Petit, Caroline Rouger, Elie Griffault, Anaïs Ferrer, Elodie Renouf and Stéphanie Cluzet (2023). Optimization of polyphenols extraction from grapevine canes using natural deep eutectic solvents. Biomass Conversion and Biorefinery [link to the publication]
Grégoire Loupit, Josep V. Fonayet, Marcus D. B. B. Lorensen, Céline Franc, Gilles De Revel, Christian Janfelt and Sarah J. Cookson (2023). Tissue‐specific stilbene accumulation is an early response to wounding/grafting as revealed by using spatial and temporal metabolomics. Plant, Cell & Environment [link to the publication]
Loupit G., Valls Fonayet J., Lorensen M. D. B. B., Franc C., de Revel G., Janfelt C. and Cookson S. J. (2023). Spatiotemporal changes in secondary metabolites during graft formation in grapevine reveal tissue-specific accumulation of metabolites in necrotic and callus tissues. bioRxiv [link to the publication]
Juliette Tison-Rosebery , Sylvia Moreira , Mélissa Eon , Lucie Campillo , Samuel Maubert , Carmen Malepeyre , Julien Célerier , Vincent Sol , Jacky Vedrenne) , Vincent Bertrin) and Nicolas Creusot) (2023). Effects of Lagarosiphon major extracts on the metabolome and photosynthesis of Microcystis aeruginosa. Comptes Rendus de l’Académie des Sciences, Paris, Chimie [link to the publication]
Ghina Hajjar, Millena C. Barros Santos, Justine Bertrand-Michel, Cécile Canlet, Florence Castelli, Nicolas Creusot, Sylvain Dechaumet, Binta Diémé, Franck Giacomoni, Patrick Giraudeau, Yann Guitton, Etienne Thévenot, Marie Tremblay-Franco, Christophe Junot, Fabien Jourdan, François Fenaille, Blandine Comte, Pierre Pétriacq and Estelle Pujos-Guillot (2023). Scaling-up metabolomics: Current state and perspectives. TrAC Trends in Analytical Chemistry [link to the publication]
Waidmann S, Béziat C, Ferreira Da Silva Santos J, Feraru E, Feraru MI, Sun L, Noura S, Boutté Y and Kleine-Vehn J. (2023). Endoplasmic reticulum stress controls PIN-LIKES abundance and thereby growth adaptation. PNAS [link to the publication]
Guillaume Decros, Thomas Dussarrat, Pierre Baldet, Cédric Cassan, Cécile Cabasson, Martine Dieuaide‐Noubhani, Alice Destailleur, Amélie Flandin, Sylvain Prigent, Kentaro Mori, Sophie Colombié, Joana Jorly, Yves Gibon, Bertrand Beauvoit and Pierre Pétriacq (2023). Enzyme‐based kinetic modelling of ASC–GSH cycle during tomato fruit development reveals the importance of reducing power and ROS availability. New Phytologist [link to the publication]
Sophie Colombié, Sylvain Prigent, Cédric Cassan, Ghislaine Hilbert‐Masson, Christel Renaud, Emilia Dell’Aversana, Petronia Carillo, Annick Moing, Chloé Beaumont, Bertrand Beauvoit, Tim McCubbin, Lars Keld Nielsen and Yves Gibon (2023). Comparative constraint‐based modelling of fruit development across species highlights nitrogen metabolism in the growth‐defence trade‐off. The Plant Journal [link to the publication] [link to the data used in the publication]
Céline Bournonville, Kentaro Mori, Paul Deslous, Guillaume Decros, Tim Blomeier, Jean-Philippe Mauxion, Joana Jorly, Stéphanie Gadin, Cédric Cassan, Mickael Maucourt, Daniel Just, Cécile Brès, Christophe Rothan, Carine Ferrand, Lucie Fernandez-Lochu, Laure Bataille, Kenji Miura, Laure Beven, Matias D Zurbriggen, Pierre Pétriacq, Yves Gibon and Pierre Baldet (2023). Blue light promotes ascorbate synthesis by deactivating the PAS/LOV photoreceptor that inhibits GDP-L-galactose phosphorylase. The Plant Cell [link to the publication]
Jeanne Dollinger, Pierre Pétriacq, Amélie Flandin and Anatja Samouelian (2023). Soil metabolomics: A powerful tool for predicting and specifying pesticide sorption. Chemosphere [link to the publication]
Annick Moing, Thierry Berton, Léa Roch, Salimata Diarrassouba, Stéphane Bernillon, Stéphanie Arrivault, Catherine Deborde, Mickaël Maucourt, Cécile Cabasson, Camille Bénard, Sylvain Prigent, Daniel Jacob, Yves Gibon and Martine Lemaire-Chamley (2023). Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites. BMC Plant Biology [link to the publication] [link to the data used in the publication]
Thuan Sarzynski, Benoît Bertrand, Clément Rigal, Pierre Marraccini, Philippe Vaast, Frédéric Georget, Claudine Campa, Cécile Abdallah, Chang Thi Quynh Nguyen, Hung Phi Nguyen, Hai Thi Thanh Nguyen, Quyen Luu Ngoc, Giang Khong Ngan, Thang Vu Viet, Luciano Navarini, Valentina Lonzarich, Laurent Bossolasco and Hervé Etienne (2023). Genetic‐environment interactions and climatic variables effect on bean physical characteristics and chemical composition of Coffea arabica. Journal of the Science of Food and Agriculture [link to the publication]
Marguerite Batsale, Marie Alonso, Stéphanie Pascal, Didier Thoraval, Richard P. Haslam, Frédéric Beaudoin, Frédéric Domergue and Jérôme Joubès (2023). Tackling functional redundancy of Arabidopsis fatty acid elongase complexes. Frontiers in Plant Science [link to the publication]
Radia Lourkisti, Sandrine Antoine, Olivier Pailly, François Luro, Yves Gibon, Julie Oustric, Jérémie Santini and Liliane Berti (2023). GABA shunt pathway is stimulated in response to early defoliation-induced carbohydrate limitation in Mandarin fruits. Heliyon [link to the publication]
Hanan Refai, Amira A. El-Gazar, Ghada M. Ragab, Doaa H. Hassan, Omar S. Ahmed, Rehab A. Hussein, Samah Shabana, Pierre Waffo-Téguo, Josep Valls, Asmaa K. Al-Mokaddem, Heba Mohammed Refat M. Selim, Einas Mohamed Yousef, Sahar K. Ali, Ahmed Salman, Hagar B. Abo-Zalam and Rofida Albash (2023). Enhanced Wound Healing Potential of Spirulina platensis Nanophytosomes: Metabolomic Profiling, Molecular Networking, and Modulation of HMGB-1 in an Excisional Wound Rat Model. Marine Drugs [link to the publication]
David Taillis, Oussama Becissa, Anthony Pébarthé-Courrouilh, Elodie Renouf, Antonio Palos-Pinto, Tristan Richard and Stéphanie Cluzet (2023). Antifungal Activities of a Grapevine Byproduct Extract Enriched in Complex Stilbenes and Stilbenes Metabolization by Botrytis cinerea. Journal of Agricultural and Food Chemistry [link to the publication]
Cécile Canlet*, Catherine Deborde*, Edern Cahoreau, Grégory Da Costa, Roselyne Gautier, Daniel Jacob, Cyril Jousse, Mélia Lacaze, Inès Le Mao, Estelle Martineau, Lindsay Peyriga, Tristan Richard, Virginie Silvestre, Mounir Traïkia, Annick Moing$, Patrick Giraudeau$ *Equal contribution and $Corresponding authors (2023). NMR metabolite quantification of a synthetic urine sample: an inter-laboratory comparison of processing workflows. Metabolomics [link to the publication] [link to the data used in the publication]
Gan Sha, Peng Sun, Xiaojing Kong, Xinyu Han, Qiping Sun, Laetitia Fouillen, Juan Zhao, Yun Li, Lei Yang, Yin Wang, Qiuwen Gong, Yaru Zhou, Wenqing Zhou, Rashmi Jain, Jie Gao, Renliang Huang, Xiaoyang Chen, Lu Zheng, Wanying Zhang, Ziting Qin, Qi Zhou, Qingdong Zeng, Kabin Xie, Jiandi Xu, Tsan-Yu Chiu, Liang Guo, Jenny C. Mortimer, Yohann Boutté, Qiang Li, Zhensheng Kang, Pamela C. Ronald and Guotian Li (2023). Genome editing of a rice CDP-DAG synthase confers multipathogen resistance. Nature [link to the publication]
Bahammou D., Recorbet G., Mamode Cassim A., Robert F., Balliau T., Van Delf P., Haddad Y., Mounier A., Mongrand S., Fouillen L. and Simon-Plas F. (2023). Revealing the lipidome and proteome of Arabidopsis thaliana plasma membrane. bioRxiv [link to the publication]
Fabien Wauquier, Line Boutin-Wittrant, Stéphanie Krisa, Josep Valls, Cedric Langhi, Yolanda F. Otero, Pascal Sirvent, Sébastien Peltier, Maxime Bargetto, Murielle Cazaubiel, Véronique Sapone, Annie Bouchard-Mercier, Véronique Roux, Nicolas Macian, Gisèle Pickering and Yohann Wittrant (2023). Circulating Human Metabolites Resulting from TOTUM-070 Absorption (a Plant-Based, Polyphenol-Rich Ingredient) Improve Lipid Metabolism in Human Hepatocytes: Lessons from an Original Ex Vivo Clinical Trial. Nutrients [link to the publication]
Clarisse Cornebise, Maude Perus, François Hermetet, Josep Valls-Fonayet, Tristan Richard, Virginie Aires and Dominique Delmas (2023). Red Wine Extract Prevents Oxidative Stress and Inflammation in ARPE-19 Retinal Cells. Cells [link to the publication]
Ishikawa T., Domergue F., Amato A. and Corellou F. (2023). SPHINGOLIPIDS AND DELTA8-SPHINGOLIPID DESATURASE FROM THE PICOALGA O. TAURI AND INVOLVEMENT IN TEMPERATURE ACCLIMATION. bioRxiv [link to the publication]
Genva M., Fougere L., Bahammou D., Mongrand S., Boutte Y. and Fouillen L. (2023). A global LC-MS2-based methodology to identify and quantify anionic phospholipids in plant samples. bioRxiv [link to the publication]
Marija Smokvarska, Vincent Bayle, Lilly Maneta-Peyret, Laetitia Fouillen, Arthur Poitout, Armelle Dongois, Jean-Bernard Fiche, Julien Gronnier, José Garcia, Herman Höfte, Marcelo Nolmann, Cyril Zipfel, Christophe Maurel, Patrick Moreau, Yvon Jaillais and Alexandre Martiniere (2023). The receptor kinase FERONIA regulates phosphatidylserine localization at the cell surface to modulate ROP signaling. Science Advances [link to the publication]
Xuan Xu, Gea Guerriero, Frederic Domergue, Olga Beine-Golovchuk, Emmanuelle Cocco, Roberto Berni, Kjell Sergeant, Jean-Francois Hausman and Sylvain Legay (2023). Characterization of MdMYB68, a suberin master regulator in russeted apples. Frontiers in Plant Science [link to the publication]
Nadia Stroppa, Elisabetta Onelli, Patrick Moreau, Lilly Maneta-Peyret, Valeria Berno, Eugenia Cammarota, Roberto Ambrosini, Marco Caccianiga, Monica Scali and Alessandra Moscatelli (2023). Sterols and Sphingolipids as New Players in Cell Wall Building and Apical Growth of Nicotiana tabacum L. Pollen Tubes. Plants [link to the publication]
Marie-Lise Jobin, Véronique De Smedt-Peyrusse, Fabien Ducrocq, Rim Baccouch, Asma Oummadi, Maria Hauge Pedersen, Brian Medel-Lacruz, Maria-Florencia Angelo, Sandrine Villette, Pierre Van Delft, Laetitia Fouillen, Sébastien Mongrand, Jana Selent, Tarson Tolentino-Cortez, Gabriel Barreda-Gómez, Stéphane Grégoire, Elodie Masson, Thierry Durroux, Jonathan A. Javitch, Ramon Guixà-González, Isabel D. Alves and Pierre Trifilieff (2023). Impact of membrane lipid polyunsaturation on dopamine D2 receptor ligand binding and signaling. Molecular Psychiatry [link to the publication]
Nathalie Lacrampe, Sophie Colombié, Doriane Dumont, Philippe Nicot, François Lecompte and Raphaël Lugan (2023). Nitrogen-mediated metabolic patterns of susceptibility to Botrytis cinerea infection in tomato (Solanum lycopersicum) stems. Planta [link to the publication]
Ines Le Mao, Grégory Da Costa, Charlyne Bautista, Gilles de Revel and Tristan Richard (2023). Application of 1H NMR metabolomics to French sparkling wines. Food Control [link to the publication]

Publications 2022

Malak Alannan, Véronique Trézéguet, Nivea Dias Amoêdo, Rodrigue Rossignol, Walid Mahfouf, Hamid Reza Rezvani, Franziska Dittrich-Domergue, Patrick Moreau, Sabrina Lacomme, Etienne Gontier, Christophe F. Grosset, Bassam Badran, Hussein Fayyad-Kazan and Aksam J. Merched (2022). Rewiring Lipid Metabolism by Targeting PCSK9 and HMGCR to Treat Liver Cancer. Cancers [link to the publication]
Malak Alannan, Hala Fatrouni, Véronique Trézéguet, Franziska Dittrich-Domergue, Patrick Moreau, Géraldine Siegfried, Benjamin Liet, Abdel-Majid Khatib, Christophe F. Grosset, Bassam Badran, Hussein Fayyad-Kazan and Aksam J. Merched (2022). Targeting PCSK9 in Liver Cancer Cells Triggers Metabolic Exhaustion and Cell Death by Ferroptosis. Cells [link to the publication]
Nicolas GUIBERT, Maïder SAINT JEAN, Claire PRIGENT‐COMBARET, Jean‐Marc DEOGRATIAS, Cécile CABASSON and Pierre PÉTRIACQ (2022). Biological Controls in Horticulture. Biocontrol of Plant Disease [link to the publication]
Gilles Vismans, Sietske van Bentum, Jelle Spooren, Yang Song, Pim Goossens, Josep Valls, Basten L. Snoek, Benjamin Thiombiano, Mario Schilder, Lemeng Dong, Harro J. Bouwmeester, Pierre Pétriacq, Corné M. J. Pieterse, Peter A. H. M. Bakker and Roeland L. Berendsen (2022). Coumarin biosynthesis genes are required after foliar pathogen infection for the creation of a microbial soil-borne legacy that primes plants for SA-dependent defenses. Scientific Reports [link to the publication]
Martins J, Pétriacq P, Flandin A, Gómez-Cadenas A, Monteiro P, Pinto G and Canhoto J. (2022). Genotype determines Arbutus unedo L. physiological and metabolomic responses to drought and recovery. Frontiers in Plant Science [link to the publication]
Valérie Wattelet-Boyer, Marina Le Guédard, Franziska Dittrich-Domergue, Lilly Maneta-Peyret, Verena Kriechbaumer, Yohann Boutté, Jean-Jacques Bessoule and Patrick Moreau (2022). Lysophosphatidic acid acyltransferases: a link with intracellular protein trafficking in Arabidopsis root cells?. Journal of experimental botany [link to the publication]
Aghiles Karim Aissat, Nassima Chaher-Bazizi, Tristan Richard, Dina Kilani-Atmani, Eric Pedrot, Elodie Renouf, Djebbar Atmani and Josep Valls Fonayet (2022). Analysis of individual anthocyanins, flavanols, flavonols and other polyphenols in Pistacia lentiscus L. fruits during ripening. Journal of Food Composition and Analysis [link to the publication]
M. Gallardo-Fernández, J. Valls-Fonayet, E. Valero, R. Hornedo-Ortega, T. Richard, A.M. Troncoso and M.C. Garcia-Parrilla (2022). Isotopic labelling-based analysis elucidates biosynthesis pathways in Saccharomyces cerevisiae for Melatonin, Serotonin and Hydroxytyrosol formation. Food Chemistry [link to the publication]
Silvana Francesca, Sabri Najai, Rong Zhou, Guillaume Decros, Cedric Cassan, Frederic Delmas, Carl-Otto Ottosen, Amalia Barone and Maria Manuela Rigano (2022). Phenotyping to dissect the biostimulant action of a protein hydrolysate in tomato plants under combined abiotic stress. Plant Physiology and Biochemistry [link to the publication]
David Taillis, Anthony Pébarthé-Courrouilh, Émilie Lepeltier, Eva Petit, Antonio Palos-Pinto, Julien Gabaston, Jean-Michel Mérillon, Tristan Richard and Stéphanie Cluzet (2022). A grapevine by-product extract enriched in oligomerised stilbenes to control downy mildews: focus on its modes of action towards <i>Plasmopara viticola</i>. OENO One [link to the publication]
Guillaume Buffeteau, Ruth Hornedo-Ortega, Julien Gabaston, Nicolas Daugey, Antonio Palos-Pinto, Anne Thienpont, Thierry Brotin, Jean-Michel Mérillon, Thierry Buffeteau and Pierre Waffo-Teguo (2022). Chiroptical and potential in vitro anti-inflammatory properties of viniferin stereoisomers from grapevine (Vitis vinifera L.). Food Chemistry [link to the publication]
Guillaume Hamion, Willy Aucher, Charles Tardif, Julie Miranda, Caroline Rouger, Christine Imbert and Marion Girardot (2022). Valorization of Invasive Plant Extracts against the Bispecies Biofilm Staphylococcus aureus–Candida albicans by a Bioguided Molecular Networking Screening. Antibiotics [link to the publication]
Grégoire Loupit, Josep Valls Fonayet, Sylvain Prigent, Duyen Prodhomme, Anne-Sophie Spilmont, Ghislaine Hilbert, Céline Franc, Gilles De Revel, Tristan Richard, Nathalie Ollat and Sarah Jane Cookson (2022). Identifying early metabolite markers of successful graft union formation in grapevine. Horticulture Research [link to the publication]
Asma Bourafai-Aziez, Daniel Jacob, Gwladys Charpentier, Emmanuel Cassin, Guillaume Rousselot, Annick Moing and Catherine Deborde (2022). Development, Validation, and Use of 1H-NMR Spectroscopy for Evaluating the Quality of Acerola-Based Food Supplements and Quantifying Ascorbic Acid. Molecules [link to the publication]
Hendrik Poorter, Xinyou Yin, Nouf Alyami, Yves Gibon and Thijs L. Pons (2022). MetaPhenomics: quantifying the many ways plants respond to their abiotic environment, using light intensity as an example. Plant and Soil [link to the publication]
Nils Paulhe, Cécile Canlet, Annelaure Damont, Lindsay Peyriga, Stéphanie Durand, Catherine Deborde, Sandra Alves, Stephane Bernillon, Thierry Berton, Raphael Bir, Alyssa Bouville, Edern Cahoreau, Delphine Centeno, Robin Costantino, Laurent Debrauwer, Alexis Delabrière, Christophe Duperier, Sylvain Emery, Amelie Flandin, Ulli Hohenester, Daniel Jacob, Charlotte Joly, Cyril Jousse, Marie Lagree, Nadia Lamari, Marie Lefebvre, Claire Lopez-Piffet, Bernard Lyan, Mickael Maucourt, Carole Migne, Marie-Francoise Olivier, Estelle Rathahao-Paris, Pierre Petriacq, Julie Pinelli, Léa Roch, Pierrick Roger, Simon Roques, Jean-Claude Tabet, Marie Tremblay-Franco, Mounir Traïkia, Anna Warnet, Vanessa Zhendre, Dominique Rolin, Fabien Jourdan, Etienne Thévenot, Annick Moing, Emilien Jamin, François Fenaille, Christophe Junot, Estelle Pujos-Guillot and Franck Giacomoni (2022). PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management. Metabolomics [link to the publication]
Christelle Lemaitre-Guillier, Agnès Chartier, Christelle Dufresne, Antonin Douillet, Stéphanie Cluzet, Josep Valls, Nicolas Aveline, Xavier Daire and Marielle Adrian (2022). Elicitor-Induced VOC Emission by Grapevine Leaves: Characterisation in the Vineyard. Molecules [link to the publication]
Poucet T., Beauvoit B., Gonzalez-Moro M., Cabasson C., Pétriacq P., Flandin A., Gibon Y., Marino D. and Dieuaide-Noubhani M. (2022). Impaired cell growth in ammonium stress explained by modelling the energy cost of vacuole expansion in tomato leaves. Recherche.data.gouv.fr [link to the publication]
Ince YÇ, Krahmer J, Fiorucci AS, Trevisan M, Galvão VC, Wigger L, Pradervand S, Fouillen L, Van Delft P, Genva M, Mongrand S, Gallart-Ayala H, Ivanisevic J and Fankhauser C. (2022). A combination of plasma membrane sterol biosynthesis and autophagy is required for shade-induced hypocotyl elongation. Nat Commun. [link to the publication]
Poucet T., Beauvoit B., Gonzalez-Moro M., Cabasson C., Pétriacq P., Flandin A., Gibon Y., Marino D. and Dieuaide-Noubhani M. (2022). Impaired cell growth in ammonium stress explained by modelling the energy cost of vacuole expansion in tomato leaves. The Plant Journal [link to the publication]
Simon Roques, Catherine Deborde, Sandrine Skiba, Olivier Cala, Yann Marchand, Annick Moing and Benoit Fauconneau (2022). Critical assessment of metabolism and related growth and quality traits in trout fed spirulina-supplemented plant-based diets. Aquaculture [link to the publication]
Nadia A Campos, Sophie Colombié, Annick Moing, Cedric Cassan, Delphine Amah, Rony Swennen, Yves Gibon and Sebastien C Carpentier (2022). From fruit growth to ripening in plantain: a careful balance between carbohydrate synthesis and breakdown. Journal of experimental botany [link to the publication]
Dussarrat T, Prigent S, Latorre C, Bernillon S, Flandin A, Díaz FP, Cassan C, Van Delft P, Jacob D, Varala K, Joubes J, Gibon Y, Rolin D, Gutiérrez RA and Pétriacq P. (2022). Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience. New Phytologist [link to the publication]
R. Groux, L. Fouillen, S. Mongrand and P. Reymond (2022). Sphingolipids are involved in insect egg-induced cell death in Arabidopsis. Plant physiology [link to the publication]
P. Laquel, E. Testet, K. Tuphile, C. Cullin, L. Fouillen, J. J. Bessoule and F. Doignon (2022). Phosphoinositides containing stearic acid are required for interaction between Rho GTPases and the exocyst to control the late steps of polarized exocytosis. Traffic [link to the publication]
L. Fouillen, S. Claverol, E. M. F. Bayer and M. S. Grison (2022). Isolation of Plasmodesmata Membranes for Lipidomic and Proteomic Analysis. Methods Mol Biol. [link to the publication]
M. B. F. Steentjes, A. L. Herrera Valderrama, L. Fouillen, D. Bahammou, T. Leisen, I. Albert, T. Nurnberger, M. Hahn, S. Mongrand, O. E. Scholten and J. A. L. van Kan (2022). Cytotoxic activity of Nep1-like proteins on monocots. New Phytologist [link to the publication]
Nicolas Creusot, Betty Chaumet, Mélissa Eon, Nicolas Mazzella, Aurélie Moreira and Soizic Morin (2022). Metabolomics insight into the influence of environmental factors in responses of freshwater biofilms to the model herbicide diuron. Environmental Science and Pollution Research [link to the publication]

Publications 2021

Dieuaide-Noubhani Martine, Destailleur Alice and Cabasson Cécile (2021). NAF – The evolution of leaf function during development is reflected in profound changes in the metabolic composition of the vacuole. Recherche.data.gouv.fr [link to the publication]
Allwood James William, Williams Alex, Uthe Henriette, van Dam Nicole M., Mur Luis A. J., Grant Murray R. and Pétriacq Pierre (2021). Unravelling Plant Responses to Stress-The Importance of Targeted and Untargeted Metabolomics. Metabolites [link to the publication]
Batsale M., Bahammou D., Fouillen L., Mongrand S., Joubes J. and Domergue F. (2021). Biosynthesis and Functions of Very-Long-Chain Fatty Acids in the Responses of Plants to Abiotic and Biotic Stresses.. Cells [link to the publication]
Beaumont Pauline, Courtois Arnaud, Richard Tristan, Krisa Stéphanie and Faure Chrystel (2021). Encapsulation of ε-Viniferin into Multi-Lamellar Liposomes: Development of a Rapid, Easy and Cost-Efficient Separation Method to Determine the Encapsulation Efficiency. Pharmaceutics [link to the publication]
Beaumont Pauline, Faure Chrystel, Courtois Arnaud, Jourdes Michael, Marchal Axel, Teissedre Pierre-Louis, Richard Tristan, Atgié Claude and Krisa Stéphanie (2021). Trans-ε-Viniferin Encapsulation in Multi-Lamellar Liposomes: Consequences on Pharmacokinetic Parameters, Biodistribution and Glucuronide Formation in Rats. Nutrients [link to the publication]
Benbouguerra Nawel, Valls-Fonayet Josep, Krisa Stephanie, Garcia François, Saucier Cédric, Richard Tristan and Hornedo-Ortega Ruth (2021). Polyphenolic Characterization of Merlot, Tannat and Syrah Skin Extracts at Different Degrees of Maturity and Anti-Inflammatory Potential in RAW 264.7 Cells. Foods (Basel, Switzerland) [link to the publication]
Berton Thierry, Bernillon Stéphane, Fernandez Olivier, Duruflé Harold, Flandin Amélie, Cassan Cédric, Jacob Daniel, Langlade Nicolas B., Gibon Yves and Moing Annick (2021). Leaf metabolomic data of eight sunflower lines and their sixteen hybrids under water deficit. OCL [link to the publication]
Burdziej Aleksandra, Bellée Anthony, Bodin Enora, Valls Fonayet Josep, Magnin Noël, Szakiel Anna, Richard Tristan, Cluzet Stéphanie and Corio-Costet Marie-France (2021). Three Types of Elicitors Induce Grapevine Resistance against Downy Mildew via Common and Specific Immune Responses. Journal of agricultural and food chemistry [link to the publication]
Chen Jinliang, Beauvoit Bertrand, Génard Michel, Colombié Sophie, Moing Annick, Vercambre Gilles, Gomès Eric, Gibon Yves and Dai Zhanwu (2021). Modelling predicts tomatoes can be bigger and sweeter if biophysical factors and transmembrane transports are fine-tuned during fruit development. The New phytologist [link to the publication]
Creusot Nicolas, Chaumet Betty, Eon Mélissa, Mazzella Nicolas, Moreira Aurélie and Morin Soizic (2021). Metabolomics insight into the influence of environmental factors in responses of freshwater biofilms to the model herbicide diuron. Environmental science and pollution research international [link to the publication]
Deborde Catherine, Hounoum Blandine Madji, Moing Annick, Maucourt Mickaël, Jacob Daniel, Corraze Geneviève, Médale Françoise and Fauconneau Benoit (2021). Putative imbalanced amino acid metabolism in rainbow trout long term fed a plant-based diet as revealed by 1H-NMR metabolomics. Journal of nutritional science [link to the publication]
Destailleur Alice, Poucet Théo, Cabasson Cécile, Alonso Ana Paula, Cocuron Jean-Christophe, Larbat Romain, Vercambre Gilles, Colombié Sophie, Petriacq Pierre, Andrieu Marie Hélène, Beauvoit Bertrand, Gibon Yves and Dieuaide-Noubhani Martine (2021). The Evolution of Leaf Function during Development Is Reflected in Profound Changes in the Metabolic Composition of the Vacuole. Metabolites [link to the publication]
El Khawand Toni, Taillis David, Da Costa Grégory, Pedrot Eric, Cluzet Stéphanie, Decendit Alain, Valls Fonayet Josep and Richard Tristan (2021). Chemical process to improve natural grapevine-cane extract effectivity against powdery mildew and grey mould. OENO One [link to the publication]
Fayad Syntia, Le Scanff Marie, Waffo-Teguo Pierre and Marchal Axel (2021). Understanding sweetness of dry wines: First evidence of astilbin isomers in red wines and quantitation in a one-century range of vintages. Food chemistry [link to the publication]
Ghoroghi Shima, Mary Benjamin, Larnicol Annabel, Asokan Nandini, Klein Annick, Osmani Naël, Busnelli Ignacio, Delalande François, Paul Nicodème, Halary Sébastien, Gros Frédéric, Fouillen Laetitia, Haeberle Anne-Marie, Royer Cathy, Spiegelhalter Coralie, André-Grégoire Gwennan, Mittelheisser Vincent, Detappe Alexandre, Murphy Kendelle, Timpson Paul, Carapito Raphaël, Blot-Chabaud Marcel, Gavard Julie, Carapito Christine, Vitale Nicolas, Lefebvre Olivier, Goetz Jacky G. and Hyenne Vincent (2021). Ral GTPases promote breast cancer metastasis by controlling biogenesis and organ targeting of exosomes. Elife [link to the publication]
Ito Yoko, Esnay Nicolas, Platre Matthieu Pierre, Wattelet-Boyer Valérie, Noack Lise C., Fougère Louise, Menzel Wilhelm, Claverol Stéphane, Fouillen Laetitia, Moreau Patrick, Jaillais Yvon and Boutté Yohann (2021). Sphingolipids mediate polar sorting of PIN2 through phosphoinositide consumption at the trans-Golgi network. Nat Commun [link to the publication]
Kassas Nawal, Fouillen Laetitia, Gasman Stéphane and Vitale Nicolas (2021). A Lipidomics Approach to Measure Phosphatidic Acid Species in Subcellular Membrane Fractions Obtained from Cultured Cells. Bio-protocol [link to the publication]
Le Mao Inès, Martin-Pernier Jean, Bautista Charlyne, Lacampagne Soizic, Richard Tristan and Da Costa Gregory (2021). 1H-NMR Metabolomics as a Tool for Winemaking Monitoring. Molecules (Basel, Switzerland) [link to the publication]
Lemaitre-Guillier Christelle, Dufresne Christelle, Chartier Agnès, Cluzet Stéphanie, Valls Josep, Jacquens Lucile, Douillet Antonin, Aveline Nicolas, Adrian Marielle and Daire Xavier (2021). VOCs Are Relevant Biomarkers of Elicitor-Induced Defences in Grapevine. Molecules (Basel, Switzerland) [link to the publication]
Mamode Cassim Adiilah, Navon Yotam, Gao Yu, Decossas Marion, Fouillen Laetitia, Grélard Axelle, Nagano Minoru, Lambert Olivier, Bahammou Delphine, van Delft Pierre, Maneta-Peyret Lilly, Simon-Plas Françoise, Heux Laurent, Jean Bruno, Fragneto Giovanna, Mortimer Jenny C., Deleu Magali, Lins Laurence and Mongrand Sébastien (2021). Biophysical analysis of the plant-specific GIPC sphingolipids reveals multiple modes of membrane regulation. The Journal of biological chemistry [link to the publication]
Medrano-Padial Concepción, Puerto María, Prieto Ana Isabel, Ayala Nahúm, Beaumont Pauline, Rouger Caroline, Krisa Stéphanie and Pichardo Silvia (2021). In Vivo Genotoxicity Evaluation of a Stilbene Extract Prior to Its Use as a Natural Additive: A Combination of the Micronucleus Test and the Comet Assay. Foods (Basel, Switzerland) [link to the publication]
Medrano-Padial Concepción, Puerto María, Richard Tristan, Cantos-Villar Emma and Pichardo Silvia (2021). Protection and reversion role of a pure stilbene extract from grapevine shoot and its major compounds against an induced oxidative stress. Journal of Functional Foods [link to the publication]
Montibus Mathilde, Vitrac Xavier, Coma Véronique, Loron Anne, Pinson-Gadais Laetitia, Ferrer Nathalie, Verdal-Bonnin Marie-Noëlle, Gabaston Julien, Waffo-Téguo Pierre, Richard-Forget Florence and Atanasova Vessela (2021). Screening of Wood/Forest and Vine By-Products as Sources of New Drugs for Sustainable Strategies to Control Fusarium graminearum and the Production of Mycotoxins. Molecules (Basel, Switzerland) [link to the publication]
Pagés Guilhem, Deborde Catherine, Lemaire-Chamley Martine, Moing Annick and Bonny Jean-Marie (2021). MRSI vs CEST MRI to understand tomato metabolism in ripening fruit: is there a better contrast?. Analytical and bioanalytical chemistry [link to the publication]
Urrutia Maria, Blein-Nicolas Mélisande, Prigent Sylvain, Bernillon Stéphane, Deborde Catherine, Balliau Thierry, Maucourt Mickaël, Jacob Daniel, Ballias Patricia, Bénard Camille, Sellier Hélène, Gibon Yves, Giauffret Catherine, Zivy Michel and Moing Annick (2021). Maize metabolome and proteome responses to controlled cold stress partly mimic early-sowing effects in the field and differ from those of Arabidopsis. Plant, cell & environment [link to the publication]
Ito Y., Esnay N., Platre M. P., Wattelet-Boyer V., Noack L. C., Fougere L., Menzel W., Claverol S., Fouillen L., Moreau P., Jaillais Y. and Boutte Y. (2021). Sphingolipids mediate polar sorting of PIN2 through phosphoinositide consumption at the trans-Golgi network. Nat Commun [link to the publication]
LMM de Almeida, JC Avice, A Morvan-Bertrand, MH Wagner, MR González-Centeno, PL Teissedre, JJ Bessoule, M Le Guédard, TH Kim, A Mollier and S Brunel-Muguet (2021). High temperature patterns at the onset of seed maturation determine seed yield and quality in oilseed rape (Brassica napus L.) in relation to sulphur nutrition. Environmental and Experimental Botany [link to the publication]
Ito Y., Esnay N., Fougere L., Platre M. P., Cordelieres F., Jaillais Y. and Boutte Y. (2021). Inhibition of Very Long Chain Fatty Acids Synthesis Mediates PI3P Homeostasis at Endosomal Compartments.. Int J Mol Sci [link to the publication]
Guyomarc’h S, Boutté Y and Laplaze L. (2021). AP2/ERF transcription factors orchestrate Very Long Chain Fatty Acids biosynthesis during Arabidopsis LR development. Molecular Plant [link to the publication]
Garot E., Dussert S., Domergue F., Joet T., Fock-Bastide I., Combes M. C. and Lashermes P. (2021). Multi-Approach Analysis Reveals Local Adaptation in a Widespread Forest Tree of Reunion Island.. Plant Cell Physiol [link to the publication]
Degraeve-Guilbault C., Pankasem N., Gueirrero M., Lemoigne C., Domergue F., Kotajima T., Suzuki I., Joubes J. and Corellou F. (2021). Temperature Acclimation of the Picoalga Ostreococcus tauri Triggers Early Fatty-Acid Variations and Involves a Plastidial omega3-Desaturase. Front Plant Sci [link to the publication]
Wattelet-Boyer, Le Guédard M, Dittrich-Domergue F, Maneta-Peyret L, Kriechbaumer V, Boutté Y, Bessoule JJ and Moreau P (2021). Phosphatidic acid synthesis by Lyso-Phosphatidic Acid Acyl-Transferases: Impact on intracellular protein transport in Arabidopsis thaliana root cells. J. Exp. Bot. [link to the publication]
Coulon D and Bréhélin C. (2021). Isolation of Plastoglobules for Lipid Analyses.. Methods Mol Biol [link to the publication]
Burgos E, Belen De Luca M, Diouf I, de Haro LA, Albert E, Sauvage C, Tao ZJ, Bermudez L, Asís R, Nesi AN, Matringe M, Bréhélin C, Guiraud T, Ferrand C, Atienza I, Jorly J, Mauxion JP, Baldet P, Fernie AR, Quadrana L, Rothan C, Causse M and Carrari F (2021). Validated MAGIC and GWAS population mapping reveals the link between vitamin E content and natural variation in chorismate metabolism in tomato. Plant J. [link to the publication]
Battaglia-Brunet F, Le Guédard M, Faure O, Charron M, Hube D, Devau N, Joulian C, Thouin H and Hellal J. (2021). Influence of agricultural amendments on arsenic biogeochemistry and phytotoxicity in a soil polluted by the destruction of arsenic-containing shells.. J Hazard Mater. [link to the publication]
J. W. Allwood, Y. Gibon, S. Osorio, W. L. Araujo, J. G. Vallarino, P. Pétriacq and A. Moing (2021). Developmental metabolomics to decipher and improve fleshy fruit quality. FEBS Open Bio [link to the publication]
Denis Coulon and Claire Bréhélin (2021). Isolation of Plastoglobules for Lipid Analyses. Plant Lipids [link to the publication]

Publications 2020

Covarrubias María Paz, Lillo-Carmona Victoria, Melet Lorena, Benedetto Gianfranco, Andrade Diego, Maucourt Mickael, Deborde Catherine, Fuentealba Claudia, Moing Annick, Valenzuela María Luisa, Pedreschi Romina and Almeida Andréa Miyasaka (2020). Metabolite Fruit Profile Is Altered in Response to Source-Sink Imbalance and Can Be Used as an Early Predictor of Fruit Quality in Nectarine. Frontiers in plant science [link to the publication]
A. Dudoit, N. Benbouguerra, T. Richard, R. Hornedo-Ortega, J. Valls-Fonayet, G. Coussot and C. Saucier (2020). α-Glucosidase Inhibitory Activity of Tannat Grape Phenolic Extracts in Relation to Their Ripening Stages. Plant Physiology [link to the publication]
C. Philippe, A. Chaïb, F. Jaomanjaka, S. Cluzet, A. Lagarde, P. Ballestra, A. Decendit, M. Petrel, O. Claisse, A. Goulet, C. Cambillau and C. Le Marrec (2020). Wine Phenolic Compounds Differently Affect the Host-Killing Activity of Two Lytic Bacteriophages Infecting the Lactic Acid Bacterium Oenococcus oeni. Food Chemistry [link to the publication]
C. Musseau, J. Jorly, S. Gadin, I. Sørensen, C. Deborde, S. Bernillon, J. P. Mauxion, I. Atienza, A. Moing, M. Lemaire-Chamley, J. K. C. Rose, C. Chevalier, C. Rothan, L. Fernandez and F. Gévaudant (2020). The tomato Guanylate-Binding Protein SlGBP1 maintains fruit tissue differentiation by keeping endopolyploid cells in a non-proliferative state. Cerevisia [link to the publication]
A. Moing, P. Pétriacq and S. Osorio (2020). Special Issue on “Fruit Metabolism and Metabolomics” Editorial. Metabolites [link to the publication]
J. Gabaston, C. Leborgne, P. Waffo-Téguo, E. Pedrot, T. Richard, J.-M. Mérillon and J. Valls Fonayet (2020). Separation and isolation of major polyphenols from maritime pine (Pinus pinaster) knots by two-step centrifugal partition chromatography monitored by LC-MS and NMR spectroscopy. Frontiers in Plant Science, section Plant Systems and Synthetic Biology [link to the publication]
I. Aja, M. B. Ruiz-Larrea, A. Courtois, S. Krisa, T. Richard and J.-I. Ruiz-Sanz (2020). Screening of Natural Stilbene Oligomers from Vitis vinifera for Anticancer Activity on Human Hepatocellular Carcinoma Cells. Spectra Analyse [link to the publication]
T. El Khawand, J. Valls Fonayet, G. Da Costa, R. Hornedo-Ortega, M. Jourdes, C. Franc, G. Revel, A. Decendit, S. Krisa and T. Richard (2020). Resveratrol transformation in red wine after heat treatment. Journal of mass spectrometry : JMS [link to the publication]
C. D. Garzon, M. Lequart, C. Rautengarten, S. Bassard, H. Sellier-Richard, P. Baldet, J. L. Heazlewood, Y. Gibon, J.-M. Domon and C. Giauffret (2020). Regulation of carbon metabolism in two maize sister lines contrasted for chilling tolerance. OENO One [link to the publication]
C. Cornebise, F. Courtaut, M. Taillandier-Coindard, J. Valls-Fonayet, T. Richard, D. Monchaud, V. Aires and D. Delmas (2020). Red Wine Extract Inhibits VEGF Secretion and Its Signaling Pathway in Retinal ARPE-19 Cells to Potentially Disrupt AMD. Molecules [link to the publication]
Simon Roques, Catherine Deborde, Nadège Richard, Yann Marchand, Laurence Larroquet, Sylvain Prigent, Sandrine Skiba-Cassy, Annick Moing and Benoit Fauconneau (2020). Proton-NMR Metabolomics of Rainbow Trout Fed a Plant-Based Diet Supplemented with Graded Levels of a Protein-Rich Yeast Fraction Reveal Several Metabolic Processes Involved in Growth. The Journal of Nutrition [link to the publication]
G. Loupit, S. Prigent, C. Franc, G. Revel, T. Richard, S. J. Cookson and J. V. Fonayet (2020). Polyphenol Profiles of Just Pruned Grapevine Canes from Wild Vitis Accessions and Vitis vinifera Cultivars. Trends in Plant Science [link to the publication]
C. Degraeve-Guilbault, R. E. Gomez, C. Lemoigne, N. Pankansem, S. Morin, K. Tuphile, J. Joubes, J. Jouhet, J. Gronnier, I. Suzuki, D. Coulon, F. Domergue and F. Corellou (2020). Plastidic Delta6 Fatty-Acid Desaturases with Distinctive Substrate Specificity Regulate the Pool of C18-PUFAs in the Ancestral Picoalga Ostreococcus tauri. Plant physiology [link to the publication]
A. Berger, A. Boscari, N. Horta Araújo, M. Maucourt, M. Hanchi, S. Bernillon, D. Rolin, A. Puppo and R. Brouquisse (2020). Plant nitrate reductases regulate nitric oxide production and nitrogen-fixing metabolism during the Medicago truncatula–Sinorhizobium meliloti symbiosis. The Plant Journal [link to the publication]
K. Djemaa-Landri, S. Hamri-Zeghichi, J. Valls, S. Cluzet, R. Tristan, N. Boulahbal, N. Kadri and K. Madani (2020). Phenolic content and antioxidant activities of Vitis vinifera L. leaf extracts obtained by conventional solvent and microwave-assisted extractions. Proceedings of the National Academy of Sciences, USA [link to the publication]
T. Bonnot, P. Martre, V. Hatte, M. Dardevet, P. Leroy, C. Bénard, N. Falagan, M. L. Martin-Magniette, C. Deborde, A. Moing, Y. Gibon, M. Pailloux, E. Bancel and C. Ravel (2020). Omics data reveal putative regulators of einkorn grain protein composition under sulphur deficiency. Journal of the Science of Food and Agriculture [link to the publication]
L. Azib, N. Debbache-Benaida, G. Da Costa, D. Atmani-Kilani, N. Saidene, G. Bouguellid, A. Ourabah, S. Krisa, T. Richard and D. Atmani (2020). Neuroprotective effects of Fraxinus angustifolia Vahl. bark extract against Alzheimer’s disease. Phytochemistry Reviews [link to the publication]
E. Tanguy, P. Coste de Bagneaux, N. Kassas, M. R. Ammar, Q. Wang, A. M. Haeberle, J. Raherindratsara, L. Fouillen, P. Y. Renard, M. Montero-Hadjadje, S. Chasserot-Golaz, S. Ory, S. Gasman, M. F. Bader and N. Vitale (2020). Mono- and Poly-unsaturated Phosphatidic Acid Regulate Distinct Steps of Regulated Exocytosis in Neuroendocrine Cells. Cell Reports [link to the publication]
C. B. Capko, G. Vercambre, B. Valentina, L. Roch, P. Valsesia, M.-M. Memah, S. Colombié, A. Moing, Y. Gibon and M. Génard (2020). Model-assisted comparison of sugar accumulation patterns in ten fleshy fruits highlights differences between annual and perennial species. Plant Science [link to the publication]
Z. N. El Ansari, I. Boussaoudi, R. Benkaddour, H. Tahiri, A. El Oualkadi, A. Badoc, P. Martin and A. Lamarti (2020). Micropropagation of the Moroccan Endemic Plant Thymus broussonetii Boiss. with Aromatic-Medicinal Value and Conservation Concern. Nucleic Acids Research [link to the publication]
E. Luna, A. Flandin, C. Cassan, S. Prigent, C. Chevanne, C. F. Kadiri, Y. Gibon and P. Pétriacq (2020). Metabolomics to Exploit the Primed Immune System of Tomato Fruit. Environ Pollut [link to the publication]
D. Jacob, R. David, S. Aubin and Y. Gibon (2020). Making experimental data tables in the life sciences more FAIR: a pragmatic approach. The Plant Cell [link to the publication]
S. Roques, C. Deborde, L. Guimas, Y. Marchand, N. Richard, D. Jacob, S. Skiba-Cassy, A. Moing and B. Fauconneau (2020). Integrative metabolomics for assessing the effect of insect (Hermetia illucens) protein extract on rainbow trout metabolism. Metabolic Engineering [link to the publication]
N. Poupin, F. Vinson, A. Moreau, A. Batut, M. Chazalviel, B. Colsch, L. Fouillen, S. Guez, S. Khoury, J. Dalloux-Chioccioli, A. Tournadre, P. Le Faouder, C. Pouyet, P. Van Delft, F. Viars, J. Bertrand-Michel and F. Jourdan (2020). Improving lipid mapping in Genome Scale Metabolic Networks using ontologies. Plant Physiology [link to the publication]
T. Richard, E. Petit, L. Pouységu, J.-P. Monti, A. Bondon, T. Sylla, J.-M. Mérillon, S. Quideau and G. Da Costa (2020). Impact of polyphenols on receptor-ligand interactions by NMR: the case of neurotensin (NT)-neurotensin receptor fragment (NTS1) complex. Journal of Biomolecular Structure and Dynamics [link to the publication]
Y. Ito, M. Grison, N. Esnay, L. Fouillen and Y. Boutte (2020). Immunopurification of Intact Endosomal Compartments for Lipid Analyses in Arabidopsis. Aquaculture Nutrition [link to the publication]
A. Dey, B. Charrier, E. Martineau, C. Deborde, E. Gandriau, A. Moing, D. Jacob, D. Eshchenko, M. Schnell, R. Melzi, D. Kurzbach, M. Ceillier, Q. Chappuis, S. Cousin, J. G. Kempf, S. Jannin, J. N. Dumez and P. Giraudeau (2020). Hyperpolarized NMR metabolomics at natural 13C abundance. Journal of Agricultural and Food Chemistry [link to the publication]
Y. Shinozaki, B. P. Beauvoit, M. Takahara, S. Hao, K. Ezura, M.-H. Andrieu, K. Nishida, K. Mori, Y. Suzuki and S. Kuhara (2020). Fruit setting rewires central metabolism via gibberellin cascades. Blood Cells, Molecules and Diseases [link to the publication]
A. Fernie, S.-N. Hashida, K. Yoshimura, B. Gakière, Z. Mou and P. Pétriacq (2020). Editorial. Journal of Agricultural and Food Chemistry [link to the publication]
L. Zhang, I. Merlin, S. Pascal, P. F. Bert, F. Domergue and G. A. Gambetta (2020). Drought activates MYB41 orthologs and induces suberization of grapevine fine roots. Metabolites [link to the publication]
J. Gabaston, T. Buffeteau, T. Brotin, J. Bisson, C. Rouger, J.-M. Mérillon and P. Waffo-Téguo (2020). Diastereomeric stilbenoid glucoside dimers from the rhizomes of Gnetum africanum. Analytical Chemistry [link to the publication]
Concepción Medrano-Padial, María Puerto, María del Mar Merchán-Gragero, Francisco Javier Moreno, Tristan Richard, Emma Cantos-Villar and Silvia Pichardo (2020). Cytotoxicity studies of a stilbene extract and its main components intended to be used as preservative in the wine industry. Journal of Advanced in Chemistry [link to the publication]
A. Moing, J. W. Allwood, A. Aharoni, J. M. Baker, M. H. Beale, S. Ben-Dor, B. Biais, F. Brigante, J. Burger, C. Deborde, A. Erban, A. Faigenboim, A. Gur, R. Goodacre, T. H. Hansen, D. Jacob, N. Katzir, J. Kopka, E. Lewinshon, M. Maucourt , S. Meir, S. Miller, R. Mumm, E. Oren, H. S. Paris, I. Rogachev, D. Rolin, U. Saar, J. K. Schjoerring, Y. Tadmor, G. Tsuri, R. C. H. De Vos, J. L. Ward, E. Yeselson, R. D. Hall and A. A. Schaffer (2020). Comparative metabolomics and molecular phylogenetics of melon (Cucumis melo, Cucurbitaceae) biodiversity. Plant Physiology [link to the publication]
O. Carmon, F. Laguerre, L. Riachy, C. Delestre-Delacour, Q. Wang, E. Tanguy, L. Jeandel, D. Cartier, T. Thahouly, A. M. Haeberle, L. Fouillen, O. Rezazgui, D. Schapman, A. Haefele, Y. Goumon, L. Galas, P. Y. Renard, S. Alexandre, N. Vitale, Y. Anouar and M. Montero-Hadjadje (2020). Chromogranin A preferential interaction with Golgi phosphatidic acid induces membrane deformation and contributes to secretory granule biogenesis. Fitoterapia [link to the publication]
J. Gabaston, J. Valls Fonayet, C. Franc, P. Waffo-Teguo, G. Revel, G. Hilbert, E. Gomès, T. Richard and J.-M. Mérillon (2020). Characterization of Stilbene Composition in Grape Berries from Wild Vitis Species in Year-To-Year Harvest. Plant Physiology [link to the publication]
J. Y. Cornu, S. Bussière, C. Coriou, T. Robert, M. Maucourt , C. Deborde, A. Moing and C. Nguyen (2020). Changes in plant growth, Cd partitioning and xylem sap composition in two contrasting sunflower cultivars exposed to low Cd concentrations in hydroponics. Plant Cell and Environment [link to the publication]
D. Jacob, C. Deborde and A. Moing (2020). BioStatFlow -Statistical Analysis Workflow for ‘Omics’ Data. Metabolomics [link to the publication]
L. Roch, S. Prigent, H. Klose, C. B. Capko, B. Beauvoit, C. Deborde, L. Fouillen, P. Van Delft, D. Jacob, B. Usadel, Z. Dai, G. M., G. Vercambre, S. Colombie, A. Moing and Y. Gibon (2020). Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species. Analytical and Bioanalytical Chemistry [link to the publication]
A. To, J. Joubes, J. Thueux, S. Kazaz, L. Lepiniec and S. Baud (2020). AtMYB92 enhances fatty acid synthesis and suberin deposition in leaves of Nicotiana benthamiana. Journal of biomolecular structure & dynamics [link to the publication]
R. F. Guerrero, J. Valls-Fonayet, T. Richard and E. Cantos-Villar (2020). A rapid quantification of stilbene content in wine by ultra-high pressure liquid chromatography – Mass spectrometry. Molecular Cancer Research [link to the publication]
T. El Khawand, J. Gabaston, D. Taillis, M.-L. Iglesias, E. Pedrot, A. Palos Pinto, J. Valls Fonayet, J. M. Merillon, A. Decendit, S. Cluzet and T. Richard (2020). A dimeric stilbene extract produced by oxidative coupling of resveratrol active against Plasmopara viticola and Botrytis cinerea for vine treatments. OENO One [link to the publication]